WebJan 22, 2024 · For GTEx, we obtained the BAM files from dbGaP (phs000424.v6.p1), which were already aligned by the GTEx consortium with TopHat (version v1.4) against the GRCh37 genome assembly 49 based on the ... WebFeb 5, 2015 · Death Classification: 4-point Hardy Scale Did Coroner/ME Perform an Autopsy? Was donor on a ventilator immediately prior to Death If yes, specify duration …
(PDF) The Genotype-Tissue Expression (GTEx) Project
Websamples if they met any of the following criteria: flagged by GTEx (SMTORMVE = FLAGGED), RNA integrity number (SMRIN) less than 6.0, or autolysis score (SMATSSCR) greater than 2. At the individual level, all samples from an individual were excluded if the individual met any of the following criteria: Hardy scale death classification (DTHHRDY) … http://research.libd.org/recount-brain/cross_studies_metadata/cross_studies_metadata.html chase bank watchung nj
gtex_traits: Traits data linked to samples in transcriptomic data …
WebGTEx_Data_V4_Annotations_SampleAttributesDSlung.txt). Digi-tal lung H&E images, in .svs format, were also obtained from GTEx for 120 samples. Subject-level variables (age, gender, and death classification based on the 4-point Hardy Scale) were obtained from the GTEx Portal (version 4: GTEx_Data_V4_ Annotations_SubjectPhenotypes_DD.xlsx). WebDeath classification based on the 4-point Hardy Scale: 1) Violent and fast death Deaths due to accident, blunt force trauma or suicide, terminal phase estimated at . 10 min. 2) Fast … WebThe Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. … chase bank waukesha hours